Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm29284-201ENSMUST00000188363 255 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm28840-205ENSMUST00000189320 615 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm28835-203ENSMUST00000190062 615 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm43054-201ENSMUST00000199495 884 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm17999-201ENSMUST00000211568 542 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 AV026068-231ENSMUST00000225862 482 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm25139-201ENSMUST00000083247 210 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.34□□□□□ -1.56
Ccdc40Q8BI79 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ccdc40Q8BI79 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.34□□□□□ -1.56
Ccdc40Q8BI79 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Ccdc40Q8BI79 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.34□□□□□ -1.56
Ccdc40Q8BI79 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Ccdc40Q8BI79 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm23910-201ENSMUST00000104597 132 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm16149-201ENSMUST00000117631 309 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm15490-201ENSMUST00000119894 387 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm7670-201ENSMUST00000121272 641 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm37492-201ENSMUST00000191948 376 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm37614-201ENSMUST00000195645 210 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm45777-201ENSMUST00000213009 301 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.33□□□□□ -1.56
Ccdc40Q8BI79 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm14836-201ENSMUST00000118567 471 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm15803-201ENSMUST00000120118 394 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm17014-201ENSMUST00000120765 168 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm17421-201ENSMUST00000167845 674 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm10074-201ENSMUST00000174543 249 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm2325-201ENSMUST00000186637 581 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm29755-201ENSMUST00000196976 948 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm4321-201ENSMUST00000200520 442 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm44603-201ENSMUST00000206820 367 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm45874-201ENSMUST00000212423 346 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm46192-201ENSMUST00000217894 326 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms