Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx55Q6ZPL9 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.22□□□□□ -1.41
Ddx55Q6ZPL9 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ddx55Q6ZPL9 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.22□□□□□ -1.41
Ddx55Q6ZPL9 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.21□□□□□ -1.41
Ddx55Q6ZPL9 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Ddx55Q6ZPL9 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm25418-201ENSMUST00000104214 129 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm15159-201ENSMUST00000117062 764 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm9836-201ENSMUST00000117132 216 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm16053-201ENSMUST00000120511 188 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm22725-201ENSMUST00000158092 110 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm3123-201ENSMUST00000163480 480 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 V1rg10-201ENSMUST00000183378 937 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm27148-201ENSMUST00000185086 160 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm29534-201ENSMUST00000187328 382 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm8498-201ENSMUST00000188227 974 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm37438-201ENSMUST00000192813 393 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm9373-201ENSMUST00000208724 599 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm5321-201ENSMUST00000072050 447 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm22043-201ENSMUST00000082993 158 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm23508-201ENSMUST00000083079 72 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ddx55Q6ZPL9 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm22266-201ENSMUST00000104011 138 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm16007-201ENSMUST00000117837 286 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm22916-201ENSMUST00000157616 119 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Mir6926-201ENSMUST00000184562 68 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm38040-201ENSMUST00000193505 225 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm45032-201ENSMUST00000205375 520 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm4057-201ENSMUST00000221407 368 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ddx55Q6ZPL9 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Gm14786-201ENSMUST00000117127 944 ntBASIC6.19□□□□□ -1.42
Ddx55Q6ZPL9 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms