Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm14307-201ENSMUST00000118930 291 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm13711-201ENSMUST00000119708 453 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm13162-201ENSMUST00000121481 454 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm14297-201ENSMUST00000129110 291 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm7613-201ENSMUST00000139070 487 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm25898-201ENSMUST00000158303 106 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm20453-201ENSMUST00000173968 226 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm20648-201ENSMUST00000175815 328 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm21638-201ENSMUST00000179473 836 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm38097-201ENSMUST00000192936 439 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Trbv24-201ENSMUST00000194614 347 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm43779-201ENSMUST00000196691 829 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm7039-201ENSMUST00000205138 346 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 AC151904.5-201ENSMUST00000218975 549 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scaf4Q6PFF0 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm12837-201ENSMUST00000120131 373 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm12307-201ENSMUST00000120581 590 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm12396-201ENSMUST00000121600 306 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm12175-201ENSMUST00000122081 345 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm24385-201ENSMUST00000122694 350 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm8715-201ENSMUST00000162728 531 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm11107-201ENSMUST00000165414 505 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm6395-201ENSMUST00000167639 691 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm17919-201ENSMUST00000173344 312 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm18900-201ENSMUST00000193218 584 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm4332-201ENSMUST00000196114 346 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm17906-201ENSMUST00000202480 901 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 Gm18405-201ENSMUST00000220743 511 ntBASIC5.87□□□□□ -1.47
Scaf4Q6PFF0 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms