Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm23550-201ENSMUST00000179003 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm25123-201ENSMUST00000179154 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm25353-201ENSMUST00000179366 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm22992-201ENSMUST00000179496 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm25019-201ENSMUST00000179732 110 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm25892-201ENSMUST00000179867 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm24092-201ENSMUST00000180257 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm3454-201ENSMUST00000185571 412 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm29454-201ENSMUST00000190805 393 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm37353-201ENSMUST00000194497 313 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm2314-201ENSMUST00000200391 586 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm9245-201ENSMUST00000200528 983 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm19219-201ENSMUST00000215863 724 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm8264-201ENSMUST00000217801 465 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm26130-201ENSMUST00000083171 138 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm23097-201ENSMUST00000083448 105 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Mir375-201ENSMUST00000083682 64 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm13416-201ENSMUST00000117264 1612 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm43187-201ENSMUST00000200652 2397 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm9836-201ENSMUST00000117132 216 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm12492-201ENSMUST00000117665 564 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm14173-201ENSMUST00000117690 278 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm12370-201ENSMUST00000117809 604 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm15531-201ENSMUST00000118062 252 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm12102-201ENSMUST00000118251 604 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm13482-201ENSMUST00000119842 254 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm15019-201ENSMUST00000120148 434 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm14331-201ENSMUST00000120396 409 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm14574-201ENSMUST00000120644 279 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm14600-201ENSMUST00000121032 630 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm22480-201ENSMUST00000122568 128 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms