Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Cux1P53564 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cux1P53564 AC159188.2-201ENSMUST00000224103 1301 ntBASIC7.43□□□□□ -1.22
Cux1P53564 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Cux1P53564 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Gm11510-201ENSMUST00000120278 347 ntBASIC7.42□□□□□ -1.22
Cux1P53564 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC7.42□□□□□ -1.22
Cux1P53564 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Cux1P53564 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Cux1P53564 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Mir6414-201ENSMUST00000183685 82 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Gm4734-201ENSMUST00000200117 777 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC7.42□□□□□ -1.22
Cux1P53564 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC7.42□□□□□ -1.22
Cux1P53564 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cux1P53564 Gm19134-201ENSMUST00000221203 487 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Cux1P53564 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Cux1P53564 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Cux1P53564 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cux1P53564 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC7.42□□□□□ -1.22
Cux1P53564 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Cux1P53564 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Cux1P53564 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Gm42702-201ENSMUST00000199515 4217 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC7.42□□□□□ -1.22
Cux1P53564 Gm45424-201ENSMUST00000210575 3300 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Gm19136-201ENSMUST00000190706 2067 ntBASIC7.42□□□□□ -1.22
Cux1P53564 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cux1P53564 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC7.42□□□□□ -1.22
Cux1P53564 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cux1P53564 Gm24944-201ENSMUST00000158330 128 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cux1P53564 Mirlet7e-201ENSMUST00000196737 93 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Gm17956-201ENSMUST00000199931 838 ntBASIC7.42□□□□□ -1.22
Cux1P53564 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cux1P53564 AC156832.3-201ENSMUST00000215591 435 ntBASIC7.42□□□□□ -1.22
Cux1P53564 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC7.42□□□□□ -1.22
Cux1P53564 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC7.41□□□□□ -1.22
Cux1P53564 Gm43682-201ENSMUST00000202150 2090 ntBASIC7.41□□□□□ -1.22
Cux1P53564 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Cux1P53564 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Cux1P53564 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Cux1P53564 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
Cux1P53564 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cux1P53564 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cux1P53564 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cux1P53564 Gm22493-201ENSMUST00000104494 132 ntBASIC7.41□□□□□ -1.22
Cux1P53564 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cux1P53564 Gm14854-201ENSMUST00000117758 841 ntBASIC7.41□□□□□ -1.22
Cux1P53564 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Cux1P53564 AL589696.1-201ENSMUST00000225711 330 ntBASIC7.41□□□□□ -1.22
Cux1P53564 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Cux1P53564 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cux1P53564 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Cux1P53564 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Cux1P53564 Gm38243-201ENSMUST00000194737 1567 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Gm43312-201ENSMUST00000201655 2466 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Cux1P53564 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Cux1P53564 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Cux1P53564 Gm22473-201ENSMUST00000104114 132 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Gm15058-201ENSMUST00000117689 458 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Gm12189-201ENSMUST00000119779 912 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Gm22119-201ENSMUST00000175594 99 ntBASIC7.4□□□□□ -1.22
Cux1P53564 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC7.4□□□□□ -1.22
Cux1P53564 Gm21070-201ENSMUST00000182425 985 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Gm27165-201ENSMUST00000183951 232 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Gm4854-201ENSMUST00000185902 574 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Gm36983-201ENSMUST00000192280 1102 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Cux1P53564 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC7.4□□□□□ -1.22
Cux1P53564 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Cux1P53564 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Cux1P53564 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Cux1P53564 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC7.4□□□□□ -1.23
Cux1P53564 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.4□□□□□ -1.23
Cux1P53564 Gm45697-201ENSMUST00000212893 2876 ntBASIC7.4□□□□□ -1.23
Cux1P53564 Gm37606-201ENSMUST00000191816 3116 ntBASIC7.4□□□□□ -1.23
Cux1P53564 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Cux1P53564 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Cux1P53564 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Cux1P53564 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Cux1P53564 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Cux1P53564 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Cux1P53564 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Cux1P53564 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Cux1P53564 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Cux1P53564 Gm15034-201ENSMUST00000120043 349 ntBASIC7.39□□□□□ -1.23
Cux1P53564 Llph-ps1-201ENSMUST00000121281 390 ntBASIC7.39□□□□□ -1.23
Cux1P53564 Llph-ps2-201ENSMUST00000122000 393 ntBASIC7.39□□□□□ -1.23
Cux1P53564 Gm21816-201ENSMUST00000179255 360 ntBASIC7.39□□□□□ -1.23
Cux1P53564 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC7.39□□□□□ -1.23
Cux1P53564 Gm43088-201ENSMUST00000197530 2347 ntBASIC7.39□□□□□ -1.23
Cux1P53564 Gm44038-201ENSMUST00000203952 889 ntBASIC7.39□□□□□ -1.23
Cux1P53564 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Cux1P53564 CT009765.2-201ENSMUST00000221331 392 ntBASIC7.39□□□□□ -1.23
Cux1P53564 AC132433.1-201ENSMUST00000221553 1101 ntBASIC7.39□□□□□ -1.23
Cux1P53564 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Cux1P53564 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms