Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.75□□□□□ -1.65
Cdx2P43241 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.75□□□□□ -1.65
Cdx2P43241 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Cdx2P43241 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx2P43241 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.75□□□□□ -1.65
Cdx2P43241 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Cdx2P43241 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Cdx2P43241 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.75□□□□□ -1.65
Cdx2P43241 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.75□□□□□ -1.65
Cdx2P43241 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.75□□□□□ -1.65
Cdx2P43241 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Cdx2P43241 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Cdx2P43241 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx2P43241 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.74□□□□□ -1.65
Cdx2P43241 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Cdx2P43241 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Gm23014-201ENSMUST00000104144 130 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm14086-201ENSMUST00000117152 173 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm14628-201ENSMUST00000117508 635 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm12423-201ENSMUST00000118334 135 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm12717-201ENSMUST00000118427 983 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Gm20701-201ENSMUST00000176082 347 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm26607-201ENSMUST00000180661 867 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm27611-201ENSMUST00000184690 108 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Gm37836-201ENSMUST00000195875 175 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm8861-201ENSMUST00000196346 832 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm8891-201ENSMUST00000198546 832 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm44237-201ENSMUST00000205183 936 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx2P43241 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.74□□□□□ -1.65
Cdx2P43241 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Cdx2P43241 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Cdx2P43241 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx2P43241 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.74□□□□□ -1.65
Cdx2P43241 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.74□□□□□ -1.65
Cdx2P43241 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx2P43241 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdx2P43241 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdx2P43241 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdx2P43241 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdx2P43241 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Cdx2P43241 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdx2P43241 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Zakit-201ENSMUST00000157677 308 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Gm23069-201ENSMUST00000158240 311 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Gm6155-201ENSMUST00000173735 341 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Gm22119-201ENSMUST00000175594 99 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Gm26828-201ENSMUST00000180640 172 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Mir6344-201ENSMUST00000183462 104 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC4.73□□□□□ -1.65
Cdx2P43241 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
Cdx2P43241 Gm18181-201ENSMUST00000190670 736 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Gm6546-201ENSMUST00000192096 766 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Gm37961-201ENSMUST00000192729 299 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Gm8599-201ENSMUST00000193033 457 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.73□□□□□ -1.65
Cdx2P43241 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.73□□□□□ -1.65
Cdx2P43241 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.73□□□□□ -1.65
Cdx2P43241 Gm6988-201ENSMUST00000222676 375 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdx2P43241 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdx2P43241 Snora52-201ENSMUST00000082732 137 ntBASIC4.73□□□□□ -1.65
Cdx2P43241 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdx2P43241 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdx2P43241 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms