Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.95□□□□□ -1.62
HttP42859 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 Gm22936-201ENSMUST00000103955 126 ntBASIC4.94□□□□□ -1.62
HttP42859 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HttP42859 Gm23300-201ENSMUST00000082712 125 ntBASIC4.94□□□□□ -1.62
HttP42859 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HttP42859 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Gm38120-201ENSMUST00000195506 4642 ntBASIC4.94□□□□□ -1.62
HttP42859 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HttP42859 Gm24503-201ENSMUST00000158454 135 ntBASIC4.94□□□□□ -1.62
HttP42859 Gm22569-201ENSMUST00000175545 124 ntBASIC4.94□□□□□ -1.62
HttP42859 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.94□□□□□ -1.62
HttP42859 Gm8069-201ENSMUST00000197887 154 ntBASIC4.94□□□□□ -1.62
HttP42859 Gm43710-201ENSMUST00000199583 452 ntBASIC4.94□□□□□ -1.62
HttP42859 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.94□□□□□ -1.62
HttP42859 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HttP42859 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HttP42859 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HttP42859 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Gm24774-201ENSMUST00000157384 134 ntBASIC4.94□□□□□ -1.62
HttP42859 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.94□□□□□ -1.62
HttP42859 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.94□□□□□ -1.62
HttP42859 Gm9245-201ENSMUST00000200528 983 ntBASIC4.94□□□□□ -1.62
HttP42859 Gm43232-201ENSMUST00000201346 364 ntBASIC4.94□□□□□ -1.62
HttP42859 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
HttP42859 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.94□□□□□ -1.62
HttP42859 Gm3338-201ENSMUST00000220982 269 ntBASIC4.94□□□□□ -1.62
HttP42859 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC4.94□□□□□ -1.62
HttP42859 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.94□□□□□ -1.62
HttP42859 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HttP42859 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
HttP42859 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HttP42859 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HttP42859 Gm14784-201ENSMUST00000121604 663 ntBASIC4.93□□□□□ -1.62
HttP42859 Gm24739-201ENSMUST00000158855 292 ntBASIC4.93□□□□□ -1.62
HttP42859 Gm6223-201ENSMUST00000178436 871 ntBASIC4.93□□□□□ -1.62
HttP42859 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.93□□□□□ -1.62
HttP42859 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.93□□□□□ -1.62
HttP42859 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC4.93□□□□□ -1.62
HttP42859 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
HttP42859 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.93□□□□□ -1.62
HttP42859 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HttP42859 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HttP42859 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HttP42859 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HttP42859 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HttP42859 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HttP42859 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC4.93□□□□□ -1.62
HttP42859 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HttP42859 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HttP42859 Gm11325-201ENSMUST00000119967 469 ntBASIC4.93□□□□□ -1.62
HttP42859 Gm22453-201ENSMUST00000122801 318 ntBASIC4.93□□□□□ -1.62
HttP42859 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.93□□□□□ -1.62
HttP42859 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HttP42859 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HttP42859 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HttP42859 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
HttP42859 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.92□□□□□ -1.62
HttP42859 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Gm43828-201ENSMUST00000196890 639 ntBASIC4.92□□□□□ -1.62
HttP42859 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.92□□□□□ -1.62
HttP42859 Xpo7-203ENSMUST00000226448 3663 ntBASIC4.92□□□□□ -1.62
HttP42859 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HttP42859 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HttP42859 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HttP42859 Gm37775-201ENSMUST00000194120 2313 ntBASIC4.92□□□□□ -1.62
HttP42859 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
HttP42859 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
HttP42859 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Gm22498-201ENSMUST00000104497 86 ntBASIC4.92□□□□□ -1.62
HttP42859 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Gm9317-201ENSMUST00000197055 862 ntBASIC4.92□□□□□ -1.62
HttP42859 Gm43084-201ENSMUST00000200696 947 ntBASIC4.92□□□□□ -1.62
HttP42859 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms