Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC5.99□□□□□ -1.45
Traf1P39428 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.99□□□□□ -1.45
Traf1P39428 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.99□□□□□ -1.45
Traf1P39428 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Traf1P39428 Gm28353-201ENSMUST00000186482 570 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Gm28533-201ENSMUST00000186741 570 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Gm29148-201ENSMUST00000188140 336 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.99□□□□□ -1.45
Traf1P39428 Gm10048-201ENSMUST00000194196 372 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Traf1P39428 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.99□□□□□ -1.45
Traf1P39428 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Traf1P39428 Gm6195-201ENSMUST00000063059 357 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Traf1P39428 Mir20a-201ENSMUST00000083508 107 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.99□□□□□ -1.45
Traf1P39428 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.99□□□□□ -1.45
Traf1P39428 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Traf1P39428 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Traf1P39428 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Traf1P39428 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Traf1P39428 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Traf1P39428 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Traf1P39428 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Traf1P39428 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Traf1P39428 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Traf1P39428 Gm7657-201ENSMUST00000118851 666 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.98□□□□□ -1.45
Traf1P39428 Gm23546-201ENSMUST00000158211 137 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Gm23115-201ENSMUST00000158480 108 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Gm21241-201ENSMUST00000179551 934 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Gm27636-201ENSMUST00000184528 122 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Traf1P39428 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm20819-201ENSMUST00000191091 925 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Gm20871-201ENSMUST00000191322 931 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm28060-201ENSMUST00000191554 189 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm4290-201ENSMUST00000206897 814 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Traf1P39428 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.98□□□□□ -1.45
Traf1P39428 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.98□□□□□ -1.45
Traf1P39428 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.98□□□□□ -1.45
Traf1P39428 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Traf1P39428 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.98□□□□□ -1.45
Traf1P39428 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.98□□□□□ -1.45
Traf1P39428 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Traf1P39428 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Traf1P39428 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.98□□□□□ -1.45
Traf1P39428 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Traf1P39428 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Traf1P39428 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.97□□□□□ -1.45
Traf1P39428 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.97□□□□□ -1.45
Traf1P39428 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Traf1P39428 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Traf1P39428 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Traf1P39428 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Traf1P39428 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.97□□□□□ -1.45
Traf1P39428 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Traf1P39428 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Traf1P39428 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Traf1P39428 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
Traf1P39428 Gm24235-201ENSMUST00000104319 129 ntBASIC5.97□□□□□ -1.45
Traf1P39428 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.97□□□□□ -1.45
Traf1P39428 Gm11484-201ENSMUST00000119808 338 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Gm12807-201ENSMUST00000121546 962 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.97□□□□□ -1.45
Traf1P39428 Gm26350-201ENSMUST00000157531 288 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Gm25332-201ENSMUST00000158038 105 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.97□□□□□ -1.45
Traf1P39428 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
Traf1P39428 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Traf1P39428 Gm28468-201ENSMUST00000188536 615 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Gm42459-201ENSMUST00000199679 742 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms