Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 AW046200-203ENSMUST00000211787 2479 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm24982-201ENSMUST00000104456 132 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm12820-201ENSMUST00000119233 342 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm22792-201ENSMUST00000157225 133 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm24751-201ENSMUST00000157844 102 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm19807-201ENSMUST00000173971 667 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm43405-201ENSMUST00000198642 337 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm18258-201ENSMUST00000210413 542 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm8672-201ENSMUST00000221200 332 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm25140-201ENSMUST00000083254 140 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm24371-201ENSMUST00000122662 267 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm26404-201ENSMUST00000158498 109 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm9443-201ENSMUST00000188406 816 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm8823-201ENSMUST00000193158 433 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm44820-201ENSMUST00000207420 396 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm45857-201ENSMUST00000212207 356 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Svet1-201ENSMUST00000209370 3940 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Gm43870-201ENSMUST00000205102 4369 ntBASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col4a6B1AVK5 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm16394-201ENSMUST00000117289 675 ntBASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm15058-201ENSMUST00000117689 458 ntBASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm12186-201ENSMUST00000119050 945 ntBASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm13973-201ENSMUST00000121371 894 ntBASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Gm27976-201ENSMUST00000183635 162 ntBASIC5.03□□□□□ -1.6
Col4a6B1AVK5 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms