Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gm14854-201ENSMUST00000117758 841 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gm6884-201ENSMUST00000119318 615 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gm24251-201ENSMUST00000157324 114 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gm3077-201ENSMUST00000165903 627 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gm27834-201ENSMUST00000183427 125 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gm18181-201ENSMUST00000190670 736 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gm44474-201ENSMUST00000196525 127 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Mir383-201ENSMUST00000083523 70 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm14750-201ENSMUST00000118262 516 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm24175-201ENSMUST00000158931 129 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm44402-201ENSMUST00000203677 238 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm18442-201ENSMUST00000220925 639 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 CT025604.1-201ENSMUST00000221111 3436 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm12186-201ENSMUST00000119050 945 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm14688-201ENSMUST00000119169 303 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm15799-201ENSMUST00000120899 289 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm24939-201ENSMUST00000158325 137 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Mir5710-201ENSMUST00000176884 69 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm6223-201ENSMUST00000178436 871 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm27818-201ENSMUST00000184536 159 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm45870-201ENSMUST00000211269 601 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm8911-201ENSMUST00000213986 652 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 AC154283.1-201ENSMUST00000228417 389 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.07□□□□□ -1.76
Col6a4A2AX52 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col6a4A2AX52 Gm37087-201ENSMUST00000192966 3309 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm37752-201ENSMUST00000193494 3309 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 AC113031.7-201ENSMUST00000228609 1928 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm14711-201ENSMUST00000117056 217 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm12231-201ENSMUST00000119447 695 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm25748-201ENSMUST00000175487 70 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm27781-201ENSMUST00000185185 92 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.06□□□□□ -1.76
Col6a4A2AX52 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 AC121997.2-201ENSMUST00000228095 2294 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms