Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm29484-201ENSMUST00000186067 324 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm18348-201ENSMUST00000191227 820 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm2623-201ENSMUST00000199229 286 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm42459-201ENSMUST00000199679 742 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm22370-201ENSMUST00000102422 83 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm11912-201ENSMUST00000117235 264 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm15531-201ENSMUST00000118062 252 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm14520-201ENSMUST00000119258 387 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm14655-201ENSMUST00000120124 578 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm13488-201ENSMUST00000120419 179 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm12650-201ENSMUST00000121966 258 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm11507-201ENSMUST00000156462 412 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm2959-201ENSMUST00000169844 621 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm9134-201ENSMUST00000193186 551 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm42643-201ENSMUST00000200504 279 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm44038-201ENSMUST00000203952 889 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm44048-201ENSMUST00000204531 361 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm8999-201ENSMUST00000204951 969 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.81□□□□□ -1.64
Lima1Q9ERG0 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm14667-201ENSMUST00000119448 1350 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm23692-201ENSMUST00000101881 160 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm25758-201ENSMUST00000103987 129 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm15227-201ENSMUST00000121844 399 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm16456-201ENSMUST00000174431 920 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Mir6400-201ENSMUST00000184870 92 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm5058-201ENSMUST00000187331 463 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm18330-201ENSMUST00000199246 547 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm3800-201ENSMUST00000221086 554 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 AV026068-231ENSMUST00000225862 482 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm24706-201ENSMUST00000082806 137 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm24525-201ENSMUST00000082917 151 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms