Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Cdc40Q9DC48 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Cdc40Q9DC48 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.71□□□□□ -1.65
Cdc40Q9DC48 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Cdc40Q9DC48 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.71□□□□□ -1.65
Cdc40Q9DC48 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Neat1-201ENSMUST00000173672 20771 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm25418-201ENSMUST00000104214 129 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm12245-201ENSMUST00000117266 357 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm13333-201ENSMUST00000119424 781 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm12422-201ENSMUST00000121431 302 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm23993-201ENSMUST00000157478 144 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm23546-201ENSMUST00000158211 137 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm27039-201ENSMUST00000182438 962 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm27551-201ENSMUST00000184258 77 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm5058-201ENSMUST00000187331 463 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm37030-201ENSMUST00000194254 295 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm18127-201ENSMUST00000208479 725 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm19073-201ENSMUST00000219978 555 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm23626-201ENSMUST00000082458 133 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm22741-201ENSMUST00000083438 165 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdc40Q9DC48 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Mir193b-201ENSMUST00000103784 79 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm14560-201ENSMUST00000118672 375 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm15791-201ENSMUST00000120365 319 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm23964-201ENSMUST00000157966 107 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm20674-201ENSMUST00000177452 369 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Mir7056-201ENSMUST00000183776 59 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 Gm27266-201ENSMUST00000184521 123 ntBASIC4.7□□□□□ -1.66
Cdc40Q9DC48 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms