Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm29284-201ENSMUST00000188363 255 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm29111-201ENSMUST00000188823 696 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm18291-201ENSMUST00000190791 301 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm28584-201ENSMUST00000191489 696 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm38050-201ENSMUST00000191904 238 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm38138-201ENSMUST00000193274 696 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm25512-201ENSMUST00000083863 107 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim11Q99PQ2 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm24273-201ENSMUST00000102332 164 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm25346-201ENSMUST00000104509 128 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm16400-201ENSMUST00000116523 1029 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm12007-201ENSMUST00000120978 597 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm16269-201ENSMUST00000160532 409 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm16298-201ENSMUST00000161107 420 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm6808-201ENSMUST00000162341 807 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm6541-201ENSMUST00000165542 561 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm5709-201ENSMUST00000177879 1165 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm28418-201ENSMUST00000186179 423 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm29385-201ENSMUST00000186831 363 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm29534-201ENSMUST00000187328 382 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm28066-201ENSMUST00000188657 472 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm29551-201ENSMUST00000190913 698 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm37265-201ENSMUST00000191698 885 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm43048-201ENSMUST00000196101 388 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm7832-201ENSMUST00000202613 880 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm8774-201ENSMUST00000203621 692 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm43897-201ENSMUST00000204019 309 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm44048-201ENSMUST00000204531 361 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm45448-201ENSMUST00000211739 209 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm8911-201ENSMUST00000213986 652 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm5023-201ENSMUST00000217442 587 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 AC102575.1-201ENSMUST00000225348 547 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 AC160999.1-201ENSMUST00000225675 810 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm23345-201ENSMUST00000083817 150 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim11Q99PQ2 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Gm15181-201ENSMUST00000120142 177 ntBASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Gm11533-201ENSMUST00000120287 477 ntBASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim11Q99PQ2 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms