Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdk5rap3Q99LM2 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdk5rap3Q99LM2 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cdk5rap3Q99LM2 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdk5rap3Q99LM2 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm13195-201ENSMUST00000117229 261 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm12039-201ENSMUST00000118219 180 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm12717-201ENSMUST00000118427 983 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm14335-201ENSMUST00000119165 810 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm16456-201ENSMUST00000174431 920 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Mir7220-201ENSMUST00000183978 60 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm27541-201ENSMUST00000184078 122 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm28683-201ENSMUST00000187134 615 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm28840-205ENSMUST00000189320 615 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm18969-201ENSMUST00000189423 730 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm28835-203ENSMUST00000190062 615 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm36998-201ENSMUST00000193205 704 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm8703-201ENSMUST00000203793 730 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm19885-201ENSMUST00000212853 343 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 AC165437.1-201ENSMUST00000228640 536 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdk5rap3Q99LM2 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm22953-201ENSMUST00000116724 101 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm12820-201ENSMUST00000119233 342 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm13245-201ENSMUST00000119646 260 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm9428-201ENSMUST00000127214 769 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm23993-201ENSMUST00000157478 144 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm26490-201ENSMUST00000157879 140 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm24295-201ENSMUST00000158298 131 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm26731-201ENSMUST00000180683 543 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm28614-201ENSMUST00000186483 458 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm42542-201ENSMUST00000197978 268 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm18747-201ENSMUST00000198129 648 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm17984-201ENSMUST00000205286 859 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Mir449a-201ENSMUST00000083641 91 ntBASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Cdk5rap3Q99LM2 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms