Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm36468-201ENSMUST00000192119 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm31572-201ENSMUST00000193341 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm30175-201ENSMUST00000194173 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm30858-201ENSMUST00000195516 615 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43033-201ENSMUST00000199682 425 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm18215-201ENSMUST00000204429 798 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm45874-201ENSMUST00000212423 346 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm9386-201ENSMUST00000095195 381 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc28aQ8CEI3 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm14756-201ENSMUST00000116395 240 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm11971-201ENSMUST00000117715 288 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm13867-201ENSMUST00000120844 395 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm14125-202ENSMUST00000120921 756 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm16557-201ENSMUST00000159182 191 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm17081-201ENSMUST00000167363 478 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm27985-201ENSMUST00000185112 378 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm37272-201ENSMUST00000193401 488 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm43005-201ENSMUST00000199015 648 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm42579-201ENSMUST00000200512 734 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Gm7040-201ENSMUST00000223271 443 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc28aQ8CEI3 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm23274-201ENSMUST00000104056 130 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm14995-201ENSMUST00000117135 391 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm4660-201ENSMUST00000131499 403 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm26347-201ENSMUST00000157526 131 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm9457-201ENSMUST00000180176 372 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm8321-201ENSMUST00000181691 980 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Mir6244-201ENSMUST00000184156 117 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm17953-201ENSMUST00000192061 667 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm44879-201ENSMUST00000207007 503 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm9269-201ENSMUST00000221661 578 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Gm5215-201ENSMUST00000054380 405 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.01□□□□□ -1.61
Ccdc28aQ8CEI3 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms