Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm14512-201ENSMUST00000117924 230 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm11196-201ENSMUST00000119052 395 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm7670-201ENSMUST00000121272 641 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm5139-201ENSMUST00000175943 249 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm37293-201ENSMUST00000191658 295 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm37882-201ENSMUST00000195254 196 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm42579-201ENSMUST00000200512 734 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm44038-201ENSMUST00000203952 889 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm33601-201ENSMUST00000210001 961 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm45660-201ENSMUST00000210267 151 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm3086-202ENSMUST00000221248 310 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Zfp429-203ENSMUST00000224684 524 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm25260-201ENSMUST00000083053 134 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.92□□□□□ -1.62
Lrif1Q8CDD9 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Lipe-203ENSMUST00000105177 1251 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm22194-201ENSMUST00000116869 95 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm14516-201ENSMUST00000120012 252 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm23537-201ENSMUST00000157536 330 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm26318-201ENSMUST00000176507 96 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Mir6903-201ENSMUST00000183597 88 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm28604-201ENSMUST00000186629 484 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm28566-201ENSMUST00000186714 484 ntBASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lrif1Q8CDD9 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms