Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm43895-201ENSMUST00000203219 855 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm44624-201ENSMUST00000208700 2278 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.14□□□□□ -1.59
Nup54Q8BTS4 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup54Q8BTS4 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm16463-201ENSMUST00000120527 721 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm13430-201ENSMUST00000121366 288 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm12854-201ENSMUST00000128518 297 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm26731-201ENSMUST00000180683 543 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm18802-201ENSMUST00000186270 888 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm18850-201ENSMUST00000211578 388 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm7665-201ENSMUST00000076710 297 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup54Q8BTS4 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.13□□□□□ -1.59
Nup54Q8BTS4 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Gm15670-201ENSMUST00000117740 447 ntBASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Gm11212-201ENSMUST00000118337 618 ntBASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Gm11346-201ENSMUST00000118346 704 ntBASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Gm12401-201ENSMUST00000118435 228 ntBASIC5.12□□□□□ -1.59
Nup54Q8BTS4 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nup54Q8BTS4 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms