Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm14656-201ENSMUST00000120342 502 ntBASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm28859-201ENSMUST00000186650 616 ntBASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm37088-201ENSMUST00000193887 406 ntBASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm32453-201ENSMUST00000204183 456 ntBASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Snora30-201ENSMUST00000083325 130 ntBASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc88aQ5SNZ0 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm13867-201ENSMUST00000120844 395 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm12752-201ENSMUST00000121657 811 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm13214-201ENSMUST00000122137 408 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm27266-201ENSMUST00000184521 123 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm7093-201ENSMUST00000223004 581 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm14933-201ENSMUST00000118840 481 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm24477-201ENSMUST00000157438 103 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm27037-201ENSMUST00000182270 960 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm27818-201ENSMUST00000184536 159 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm23594-201ENSMUST00000104307 134 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm13311-201ENSMUST00000117863 379 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm14082-201ENSMUST00000118582 801 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm28615-201ENSMUST00000187527 482 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm37700-201ENSMUST00000192617 965 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm10292-202ENSMUST00000193165 585 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Ccdc88aQ5SNZ0 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm13808-201ENSMUST00000121353 184 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm12755-201ENSMUST00000122297 282 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm26404-201ENSMUST00000158498 109 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms