Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim41Q5NCC3 AC138284.1-201ENSMUST00000214258 3236 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm13416-201ENSMUST00000117264 1612 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Mir708-201ENSMUST00000102189 109 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm24275-201ENSMUST00000116780 146 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm25163-201ENSMUST00000158905 104 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Mir5107-201ENSMUST00000175586 88 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm20203-201ENSMUST00000192352 332 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm45814-201ENSMUST00000212646 775 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 AC147240.1-201ENSMUST00000218767 431 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm5582-201ENSMUST00000075251 522 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm15011-201ENSMUST00000117724 1480 ntBASIC11.32□□□□□ -0.6
Trim41Q5NCC3 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm23440-201ENSMUST00000104299 130 ntBASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm24216-201ENSMUST00000158259 117 ntBASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm21070-201ENSMUST00000182425 985 ntBASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm27853-201ENSMUST00000184176 250 ntBASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm28141-201ENSMUST00000186676 342 ntBASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm43354-201ENSMUST00000196862 346 ntBASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm45375-201ENSMUST00000210338 280 ntBASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm8256-203ENSMUST00000228692 591 ntBASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Gm8853-201ENSMUST00000198366 1344 ntBASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim41Q5NCC3 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm43319-201ENSMUST00000198036 2270 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 CT030185.1-201ENSMUST00000222940 2289 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm43176-201ENSMUST00000199653 2989 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm12057-201ENSMUST00000117244 1427 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm22778-201ENSMUST00000104090 128 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm16431-201ENSMUST00000117454 431 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm13137-201ENSMUST00000118035 345 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm23343-201ENSMUST00000158964 143 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm45034-201ENSMUST00000206831 482 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm19140-201ENSMUST00000209790 421 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 AC170086.2-201ENSMUST00000224733 803 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm38178-201ENSMUST00000194502 2471 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm43121-201ENSMUST00000199065 1305 ntBASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim41Q5NCC3 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim41Q5NCC3 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms