Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm11486-201ENSMUST00000107322 478 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm6134-201ENSMUST00000117265 171 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm13579-201ENSMUST00000118519 517 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm14619-201ENSMUST00000120480 168 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm15057-201ENSMUST00000121516 534 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm25290-201ENSMUST00000122796 144 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm25342-201ENSMUST00000157459 122 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm22084-201ENSMUST00000157585 105 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm24395-201ENSMUST00000158139 125 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm26404-201ENSMUST00000158498 109 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm25714-201ENSMUST00000158626 296 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm6632-201ENSMUST00000168425 954 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Mir3097-201ENSMUST00000175356 67 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm27960-201ENSMUST00000183445 184 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Mir6418-201ENSMUST00000185075 115 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm2325-201ENSMUST00000186637 581 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm28974-201ENSMUST00000187893 231 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm4574-201ENSMUST00000207804 542 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm45874-201ENSMUST00000212423 346 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 AC164164.2-201ENSMUST00000221809 785 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 AC123665.6-201ENSMUST00000228568 538 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm25139-201ENSMUST00000083247 210 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm28322-201ENSMUST00000185627 1475 ntBASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Ptchd3Q0EEE2 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm38029-201ENSMUST00000192669 2090 ntBASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm23910-201ENSMUST00000104597 132 ntBASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm8061-201ENSMUST00000122380 350 ntBASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm5699-201ENSMUST00000152491 723 ntBASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm24216-201ENSMUST00000158259 117 ntBASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm8256-201ENSMUST00000169178 453 ntBASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm27225-201ENSMUST00000183833 557 ntBASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm27409-201ENSMUST00000184727 80 ntBASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ptchd3Q0EEE2 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms