Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm45392-201ENSMUST00000210441 214 ntBASIC4.97□□□□□ -1.61
HttP42859 Gm18487-201ENSMUST00000215826 878 ntBASIC4.97□□□□□ -1.61
HttP42859 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HttP42859 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.97□□□□□ -1.61
HttP42859 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HttP42859 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.97□□□□□ -1.61
HttP42859 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HttP42859 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HttP42859 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.97□□□□□ -1.61
HttP42859 Gm26350-201ENSMUST00000157531 288 ntBASIC4.97□□□□□ -1.61
HttP42859 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HttP42859 Gm8296-201ENSMUST00000185597 524 ntBASIC4.97□□□□□ -1.61
HttP42859 Gm19243-201ENSMUST00000198592 269 ntBASIC4.97□□□□□ -1.61
HttP42859 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HttP42859 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.97□□□□□ -1.61
HttP42859 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HttP42859 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
HttP42859 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC4.96□□□□□ -1.61
HttP42859 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
HttP42859 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
HttP42859 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HttP42859 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HttP42859 Gm38257-201ENSMUST00000195881 2761 ntBASIC4.96□□□□□ -1.62
HttP42859 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HttP42859 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HttP42859 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
HttP42859 Gm12638-201ENSMUST00000119531 298 ntBASIC4.96□□□□□ -1.62
HttP42859 Gm24931-201ENSMUST00000158324 107 ntBASIC4.96□□□□□ -1.62
HttP42859 Mir5106-201ENSMUST00000174936 73 ntBASIC4.96□□□□□ -1.62
HttP42859 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.96□□□□□ -1.62
HttP42859 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HttP42859 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.96□□□□□ -1.62
HttP42859 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HttP42859 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.96□□□□□ -1.62
HttP42859 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HttP42859 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HttP42859 Gm25833-201ENSMUST00000104137 133 ntBASIC4.96□□□□□ -1.62
HttP42859 Gm14082-201ENSMUST00000118582 801 ntBASIC4.96□□□□□ -1.62
HttP42859 Gm25104-201ENSMUST00000122476 163 ntBASIC4.96□□□□□ -1.62
HttP42859 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.96□□□□□ -1.62
HttP42859 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.96□□□□□ -1.62
HttP42859 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
HttP42859 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HttP42859 Gm25140-201ENSMUST00000083254 140 ntBASIC4.96□□□□□ -1.62
HttP42859 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HttP42859 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
HttP42859 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.95□□□□□ -1.62
HttP42859 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HttP42859 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.95□□□□□ -1.62
HttP42859 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC4.95□□□□□ -1.62
HttP42859 Gm4479-201ENSMUST00000178807 171 ntBASIC4.95□□□□□ -1.62
HttP42859 Gm45458-201ENSMUST00000209900 522 ntBASIC4.95□□□□□ -1.62
HttP42859 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 AC160029.1-201ENSMUST00000219628 2678 ntBASIC4.95□□□□□ -1.62
HttP42859 Gm37530-201ENSMUST00000191759 4932 ntBASIC4.95□□□□□ -1.62
HttP42859 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.95□□□□□ -1.62
HttP42859 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HttP42859 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
HttP42859 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HttP42859 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HttP42859 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HttP42859 Gm22590-201ENSMUST00000104247 128 ntBASIC4.95□□□□□ -1.62
HttP42859 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.95□□□□□ -1.62
HttP42859 Gm22514-201ENSMUST00000122547 308 ntBASIC4.95□□□□□ -1.62
HttP42859 Gm21654-201ENSMUST00000188086 691 ntBASIC4.95□□□□□ -1.62
HttP42859 Gm21617-201ENSMUST00000188297 691 ntBASIC4.95□□□□□ -1.62
HttP42859 Gm38185-201ENSMUST00000193195 694 ntBASIC4.95□□□□□ -1.62
HttP42859 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC4.95□□□□□ -1.62
HttP42859 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HttP42859 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HttP42859 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC4.95□□□□□ -1.62
HttP42859 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms