Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox6P40645 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox6P40645 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox6P40645 Gm24350-201ENSMUST00000104163 133 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm8595-201ENSMUST00000118250 630 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm14601-201ENSMUST00000120892 236 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm24402-201ENSMUST00000157873 91 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Mir1963-201ENSMUST00000158594 59 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm7609-204ENSMUST00000161424 461 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Trbv10-201ENSMUST00000168322 289 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm18828-202ENSMUST00000181035 310 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 Mir7222-201ENSMUST00000183740 75 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 Gm8282-201ENSMUST00000187559 483 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm38011-201ENSMUST00000193312 279 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm20770-201ENSMUST00000193474 694 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox6P40645 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox6P40645 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
Sox6P40645 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 Gm18468-201ENSMUST00000207321 369 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm18470-201ENSMUST00000207467 420 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm18465-201ENSMUST00000207468 369 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 Gm18464-201ENSMUST00000207803 420 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm18458-201ENSMUST00000207908 369 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Gm18461-201ENSMUST00000208421 420 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Sox6P40645 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.7□□□□□ -1.66
Sox6P40645 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox6P40645 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.7□□□□□ -1.66
Sox6P40645 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox6P40645 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Sox6P40645 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox6P40645 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.7□□□□□ -1.66
Sox6P40645 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox6P40645 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Sox6P40645 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox6P40645 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Sox6P40645 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox6P40645 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox6P40645 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox6P40645 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox6P40645 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
Sox6P40645 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Sox6P40645 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm24429-201ENSMUST00000104076 132 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Gm23746-201ENSMUST00000104229 125 ntBASIC4.69□□□□□ -1.66
Sox6P40645 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm13195-201ENSMUST00000117229 261 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Gm7206-201ENSMUST00000117730 508 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Gm12717-201ENSMUST00000118427 983 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Gm5383-201ENSMUST00000121177 617 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox6P40645 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox6P40645 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.69□□□□□ -1.66
Sox6P40645 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox6P40645 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.69□□□□□ -1.66
Sox6P40645 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm19936-201ENSMUST00000216414 838 ntBASIC4.69□□□□□ -1.66
Sox6P40645 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox6P40645 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Gm6474-201ENSMUST00000223250 699 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox6P40645 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox6P40645 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Sox6P40645 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox6P40645 Gm23459-201ENSMUST00000083259 131 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC4.69□□□□□ -1.66
Sox6P40645 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.69□□□□□ -1.66
Sox6P40645 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox6P40645 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.69□□□□□ -1.66
Sox6P40645 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox6P40645 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox6P40645 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox6P40645 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox6P40645 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox6P40645 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox6P40645 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox6P40645 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox6P40645 Gm22273-201ENSMUST00000104040 132 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Gm24170-201ENSMUST00000104124 133 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms