Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm18199-201ENSMUST00000173820 835 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm5139-201ENSMUST00000175943 249 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Mir7087-201ENSMUST00000184840 70 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Mir6418-201ENSMUST00000185075 115 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm5066-201ENSMUST00000188479 822 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm17953-201ENSMUST00000192061 667 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm37070-201ENSMUST00000193272 460 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Ighv5-5-201ENSMUST00000193826 329 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC3.93□□□□□ -1.78
Hmgb3O54879 AC136146.1-201ENSMUST00000196180 91 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm42720-201ENSMUST00000196813 300 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm22711-202ENSMUST00000197029 135 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm42459-201ENSMUST00000199679 742 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm4803-201ENSMUST00000218729 1279 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 AC162467.1-201ENSMUST00000220254 621 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm6195-201ENSMUST00000063059 357 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm16415-201ENSMUST00000080097 489 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm10916-201ENSMUST00000080330 483 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr1143-201ENSMUST00000090708 945 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm25821-201ENSMUST00000093657 133 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hmgb3O54879 AC139218.1-201ENSMUST00000228215 4287 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm37053-201ENSMUST00000192399 2087 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Gm7680-201ENSMUST00000216198 1348 ntBASIC3.93□□□□□ -1.78
Hmgb3O54879 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hmgb3O54879 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm45160-201ENSMUST00000207112 3099 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm10552-201ENSMUST00000113396 372 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm7206-201ENSMUST00000117730 508 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm11825-201ENSMUST00000120710 736 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm7670-201ENSMUST00000121272 641 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 n-R5s174-201ENSMUST00000122638 121 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 Mir7212-201ENSMUST00000184098 61 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Mir219c-201ENSMUST00000199860 60 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm42643-201ENSMUST00000200504 279 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm44523-201ENSMUST00000205616 417 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 AC138284.2-201ENSMUST00000213982 567 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 AC211878.6-201ENSMUST00000221896 358 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 AC241593.2-201ENSMUST00000225099 510 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Fus-202ENSMUST00000079045 2623 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm26814-201ENSMUST00000181178 4149 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm38259-201ENSMUST00000194602 3534 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms