Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm45343-201ENSMUST00000210452 828 ntBASIC5.08□□□□□ -1.6
Col4a6B1AVK5 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Gm7093-201ENSMUST00000223004 581 ntBASIC5.08□□□□□ -1.6
Col4a6B1AVK5 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.08□□□□□ -1.6
Col4a6B1AVK5 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col4a6B1AVK5 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm14610-201ENSMUST00000118358 966 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm13172-201ENSMUST00000118685 256 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm12852-201ENSMUST00000119478 719 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm13132-201ENSMUST00000121194 472 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm13214-201ENSMUST00000122137 408 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm25923-201ENSMUST00000158312 138 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm22940-201ENSMUST00000158560 155 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm25592-201ENSMUST00000082635 131 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col4a6B1AVK5 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Mir761-201ENSMUST00000103245 76 ntBASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Zfp389-201ENSMUST00000118425 675 ntBASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Gm14933-201ENSMUST00000118840 481 ntBASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Gm22326-201ENSMUST00000158897 351 ntBASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Gm20428-201ENSMUST00000174365 283 ntBASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Gm9569-201ENSMUST00000187492 787 ntBASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Mir323-201ENSMUST00000083683 86 ntBASIC5.06□□□□□ -1.6
Col4a6B1AVK5 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
Col4a6B1AVK5 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm24935-201ENSMUST00000103770 110 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm26490-201ENSMUST00000157879 140 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm5473-201ENSMUST00000179326 642 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm29576-201ENSMUST00000188020 678 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm28354-201ENSMUST00000190904 678 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm2522-201ENSMUST00000204280 322 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm45539-201ENSMUST00000210313 428 ntBASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col4a6B1AVK5 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms