Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 n-R5s48-201ENSMUST00000122482 110 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm29489-201ENSMUST00000188934 324 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 CT009480.2-201ENSMUST00000225152 3369 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 AC121094.1-201ENSMUST00000224766 1345 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 AC132852.2-201ENSMUST00000216052 2794 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm9408-201ENSMUST00000197375 1505 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm19084-201ENSMUST00000222939 1762 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm23481-201ENSMUST00000104173 131 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm14933-201ENSMUST00000118840 481 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm11699-201ENSMUST00000119016 401 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm12189-201ENSMUST00000119779 912 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Mir7047-201ENSMUST00000184595 64 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm4602-201ENSMUST00000203198 308 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm43968-201ENSMUST00000203388 389 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm43523-201ENSMUST00000197397 2878 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm42994-201ENSMUST00000195964 2549 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col6a4A2AX52 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a4A2AX52 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Col6a4A2AX52 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Col6a4A2AX52 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC4.09□□□□□ -1.76
Col6a4A2AX52 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.09□□□□□ -1.76
Col6a4A2AX52 Neat1-201ENSMUST00000173672 20771 ntBASIC4.09□□□□□ -1.76
Col6a4A2AX52 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.09□□□□□ -1.76
Col6a4A2AX52 Gm23905-201ENSMUST00000157568 109 ntBASIC4.09□□□□□ -1.76
Col6a4A2AX52 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Col6a4A2AX52 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Col6a4A2AX52 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a4A2AX52 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.09□□□□□ -1.76
Col6a4A2AX52 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a4A2AX52 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Col6a4A2AX52 AC125095.1-201ENSMUST00000228387 2020 ntBASIC4.08□□□□□ -1.76
Col6a4A2AX52 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a4A2AX52 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms