Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm24944-201ENSMUST00000158330 128 ntBASIC5.41□□□□□ -1.54
Scn3aA2ASI5 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Gm29664-201ENSMUST00000191125 463 ntBASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Scn3aA2ASI5 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gm22676-201ENSMUST00000116972 129 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gm12186-201ENSMUST00000119050 945 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gm23501-201ENSMUST00000157744 256 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gm23069-201ENSMUST00000158240 311 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gm17152-201ENSMUST00000172430 535 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Mir7022-201ENSMUST00000183749 61 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gm38221-201ENSMUST00000195146 365 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.4□□□□□ -1.54
Scn3aA2ASI5 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Scn3aA2ASI5 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm15779-201ENSMUST00000117470 412 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Zfp389-201ENSMUST00000118425 675 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm25923-201ENSMUST00000158312 138 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm21850-201ENSMUST00000179792 359 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm27883-201ENSMUST00000183941 102 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm27568-201ENSMUST00000184220 99 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm45007-201ENSMUST00000206237 366 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm33626-201ENSMUST00000206790 828 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.4□□□□□ -1.55
Scn3aA2ASI5 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm12189-201ENSMUST00000119779 912 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm13808-201ENSMUST00000121353 184 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm16285-201ENSMUST00000162999 347 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm37700-201ENSMUST00000192617 965 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm32536-201ENSMUST00000205209 445 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Scn3aA2ASI5 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm25846-201ENSMUST00000158013 135 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms