Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm37072-201ENSMUST00000194570 837 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Gm7825-201ENSMUST00000204046 416 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Gm7040-201ENSMUST00000223271 443 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Gm5215-201ENSMUST00000054380 405 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Desi2-202ENSMUST00000069568 1193 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Gm8822-201ENSMUST00000118948 2347 ntBASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
H2afb2S4R1M3 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H2afb2S4R1M3 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
H2afb2S4R1M3 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
H2afb2S4R1M3 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H2afb2S4R1M3 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
H2afb2S4R1M3 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
H2afb2S4R1M3 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
H2afb2S4R1M3 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
H2afb2S4R1M3 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
H2afb2S4R1M3 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm14995-201ENSMUST00000117135 391 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm12985-201ENSMUST00000118376 183 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm13924-201ENSMUST00000119899 486 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm16259-201ENSMUST00000145241 553 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm5139-201ENSMUST00000175943 249 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm21803-201ENSMUST00000188897 693 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm4602-201ENSMUST00000203198 308 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm32536-201ENSMUST00000205209 445 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Gm18871-201ENSMUST00000218655 745 ntBASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
H2afb2S4R1M3 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 AC154368.2-201ENSMUST00000222334 1724 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm13451-201ENSMUST00000117649 592 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm12641-201ENSMUST00000117874 985 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm13787-201ENSMUST00000120422 168 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm24382-201ENSMUST00000122698 107 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm25290-201ENSMUST00000122796 144 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm25714-201ENSMUST00000158626 296 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm17044-201ENSMUST00000168549 828 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Mir7653-201ENSMUST00000184358 61 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm10292-202ENSMUST00000193165 585 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm37243-201ENSMUST00000193407 595 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm20056-201ENSMUST00000194813 519 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm44261-201ENSMUST00000203337 209 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm44648-201ENSMUST00000208267 329 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm20368-201ENSMUST00000220716 301 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms