Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm26298-201ENSMUST00000116956 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm23844-201ENSMUST00000116959 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm24484-201ENSMUST00000117009 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm25347-201ENSMUST00000117026 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm22112-201ENSMUST00000117032 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm14516-201ENSMUST00000120012 252 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm22991-201ENSMUST00000178126 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm25754-201ENSMUST00000178653 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm22419-201ENSMUST00000178780 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm24802-201ENSMUST00000178897 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm25208-201ENSMUST00000178964 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm24567-201ENSMUST00000179294 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm23943-201ENSMUST00000179712 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm25228-201ENSMUST00000180121 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm23304-201ENSMUST00000180209 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm29159-201ENSMUST00000187969 379 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm42458-201ENSMUST00000201914 369 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm18215-201ENSMUST00000204429 798 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm23459-201ENSMUST00000083259 131 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm9386-201ENSMUST00000095195 381 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Lima1Q9ERG0 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Lima1Q9ERG0 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Lima1Q9ERG0 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Mir466j-201ENSMUST00000116876 122 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm15073-201ENSMUST00000117432 634 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm14601-201ENSMUST00000120892 236 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm22383-201ENSMUST00000158188 327 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm9027-201ENSMUST00000165914 661 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Esd-ps-201ENSMUST00000170684 847 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm17152-201ENSMUST00000172430 535 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm29668-201ENSMUST00000187802 315 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm9173-201ENSMUST00000198054 400 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm42579-201ENSMUST00000200512 734 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm43968-201ENSMUST00000203388 389 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm32536-201ENSMUST00000205209 445 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.83□□□□□ -1.64
Lima1Q9ERG0 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lima1Q9ERG0 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm38264-201ENSMUST00000194850 2032 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm24170-201ENSMUST00000104124 133 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm12901-201ENSMUST00000118690 532 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm14930-201ENSMUST00000118864 652 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm15828-201ENSMUST00000119911 522 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm22601-201ENSMUST00000157595 250 ntBASIC4.82□□□□□ -1.64
Lima1Q9ERG0 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms