Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm44776-201ENSMUST00000207212 381 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Mir342-201ENSMUST00000083502 99 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.74□□□□□ -1.65
Cdc40Q9DC48 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm11912-201ENSMUST00000117235 264 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm12734-201ENSMUST00000120228 948 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm25348-201ENSMUST00000158961 111 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm4321-201ENSMUST00000200520 442 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm18482-201ENSMUST00000202405 760 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm20997-201ENSMUST00000205148 231 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm44604-201ENSMUST00000205475 496 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm23623-201ENSMUST00000082461 107 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm24207-201ENSMUST00000082781 108 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm24706-201ENSMUST00000082806 137 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Snord59a-201ENSMUST00000082844 74 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Cdc40Q9DC48 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm15560-201ENSMUST00000117107 643 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm11212-201ENSMUST00000118337 618 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm15034-201ENSMUST00000120043 349 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm9435-201ENSMUST00000120379 877 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm7973-201ENSMUST00000122107 488 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm25293-201ENSMUST00000122792 285 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm7316-201ENSMUST00000165395 445 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm25534-201ENSMUST00000175365 125 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm18117-201ENSMUST00000187720 742 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm5285-201ENSMUST00000193089 666 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm37659-201ENSMUST00000194574 111 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm3148-201ENSMUST00000203594 612 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm45845-201ENSMUST00000207326 582 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm5750-201ENSMUST00000218711 801 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm2099-201ENSMUST00000220979 412 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.72□□□□□ -1.65
Cdc40Q9DC48 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.72□□□□□ -1.65
Cdc40Q9DC48 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms