Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm14930-201ENSMUST00000118864 652 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm15452-201ENSMUST00000119877 240 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm12104-201ENSMUST00000120359 979 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm22336-201ENSMUST00000157719 107 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm17030-201ENSMUST00000167016 393 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm27019-201ENSMUST00000183056 404 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Mir7029-201ENSMUST00000184777 61 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm28412-201ENSMUST00000187243 177 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm29105-201ENSMUST00000187256 450 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm28116-201ENSMUST00000189064 387 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm43689-201ENSMUST00000195951 427 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm21006-201ENSMUST00000196930 667 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm44149-201ENSMUST00000204256 226 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm34005-201ENSMUST00000215834 282 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm18628-201ENSMUST00000220584 475 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm46424-201ENSMUST00000221567 168 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm33312-201ENSMUST00000222443 332 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim42Q9D2H5 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Mir467h-201ENSMUST00000116759 121 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm12935-201ENSMUST00000119352 246 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm5383-201ENSMUST00000121177 617 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm25969-201ENSMUST00000157166 132 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm25057-201ENSMUST00000157366 88 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm24756-201ENSMUST00000177002 96 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm17981-201ENSMUST00000191109 739 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm22897-202ENSMUST00000197782 127 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm3103-201ENSMUST00000198073 752 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm43144-201ENSMUST00000198256 485 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm43892-201ENSMUST00000204373 265 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm45198-201ENSMUST00000206796 591 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm6885-201ENSMUST00000217261 372 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 AC140930.4-201ENSMUST00000220750 150 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim42Q9D2H5 Gm25401-201ENSMUST00000082975 106 ntBASIC6.49□□□□□ -1.37
Trim42Q9D2H5 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms