Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Mir6989-201ENSMUST00000184812 65 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm6693-201ENSMUST00000189583 813 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm37073-201ENSMUST00000192469 1222 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm37213-201ENSMUST00000193077 586 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm17952-201ENSMUST00000193914 747 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm43350-201ENSMUST00000196382 711 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm43629-201ENSMUST00000201782 704 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm18861-201ENSMUST00000202509 1186 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm9278-201ENSMUST00000205508 553 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 AC156950.1-201ENSMUST00000219604 456 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm3333-202ENSMUST00000221763 1044 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm7887-201ENSMUST00000056948 537 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm2099-202ENSMUST00000223310 3341 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm23424-201ENSMUST00000103889 110 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm11270-201ENSMUST00000117685 471 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm11908-201ENSMUST00000117755 347 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm11984-201ENSMUST00000118142 766 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm24692-201ENSMUST00000157761 146 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm3123-201ENSMUST00000163480 480 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Mir7046-201ENSMUST00000183435 66 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm412-201ENSMUST00000193360 948 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm17954-201ENSMUST00000195893 607 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ddx56Q9D0R4 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 162.8 ms