Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm22676-201ENSMUST00000116972 129 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm11909-201ENSMUST00000121424 759 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm16060-201ENSMUST00000153140 478 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm25669-201ENSMUST00000157699 112 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Mir7028-201ENSMUST00000185016 64 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm37492-201ENSMUST00000191948 376 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm34176-201ENSMUST00000192621 474 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm18553-201ENSMUST00000194152 634 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm42663-201ENSMUST00000199883 351 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm43629-201ENSMUST00000201782 704 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm45215-201ENSMUST00000206407 395 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm17766-201ENSMUST00000209223 442 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 AC158536.1-201ENSMUST00000222510 256 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Smc1aQ9CU62 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm15560-201ENSMUST00000117107 643 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm14874-201ENSMUST00000118995 438 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm13787-201ENSMUST00000120422 168 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Scarna13-201ENSMUST00000158164 275 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm20674-201ENSMUST00000177452 369 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm10784-201ENSMUST00000178715 238 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm9499-201ENSMUST00000180888 964 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm29474-201ENSMUST00000187688 379 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.74□□□□□ -1.49
Smc1aQ9CU62 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms