Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm27854-201ENSMUST00000175578 244 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm18952-201ENSMUST00000194471 846 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Mir6516-201ENSMUST00000196236 110 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm43054-201ENSMUST00000199495 884 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm19617-201ENSMUST00000202977 308 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm2926-201ENSMUST00000205625 239 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm45700-201ENSMUST00000205866 347 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm19196-201ENSMUST00000209258 357 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm18587-201ENSMUST00000213736 841 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm19181-201ENSMUST00000218891 940 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Olfr815-201ENSMUST00000071557 951 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm7808-201ENSMUST00000082002 387 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm22456-201ENSMUST00000082578 125 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.81□□□□□ -1.48
Pcdha9Q91Y11 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm8430-201ENSMUST00000119780 471 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm15885-201ENSMUST00000122114 388 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm23317-201ENSMUST00000157999 129 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm26401-201ENSMUST00000158502 76 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Mir6417-201ENSMUST00000183815 116 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm44214-201ENSMUST00000204153 606 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Mir331-201ENSMUST00000083673 96 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.8□□□□□ -1.48
Pcdha9Q91Y11 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Pcdha9Q91Y11 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Pcdha9Q91Y11 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdha9Q91Y11 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdha9Q91Y11 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Pcdha9Q91Y11 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Pcdha9Q91Y11 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Pcdha9Q91Y11 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 126.7 ms