Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CopaQ8CIE6 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CopaQ8CIE6 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.63□□□□□ -1.51
CopaQ8CIE6 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CopaQ8CIE6 Gm16421-201ENSMUST00000117616 1557 ntBASIC5.63□□□□□ -1.51
CopaQ8CIE6 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CopaQ8CIE6 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CopaQ8CIE6 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CopaQ8CIE6 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm13363-201ENSMUST00000122008 522 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm12591-201ENSMUST00000122407 1177 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm26489-201ENSMUST00000157880 264 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm25227-201ENSMUST00000158204 112 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm16125-201ENSMUST00000159003 339 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Mir3110-201ENSMUST00000175053 80 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm22650-201ENSMUST00000175138 105 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm24417-201ENSMUST00000178123 79 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm24653-201ENSMUST00000178541 79 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm25934-201ENSMUST00000178642 79 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm27985-201ENSMUST00000185112 378 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm38040-201ENSMUST00000193505 225 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm17952-201ENSMUST00000193914 747 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm44281-201ENSMUST00000203090 166 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm5735-201ENSMUST00000207053 167 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm9373-201ENSMUST00000208724 599 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 AC127302.1-201ENSMUST00000215973 1111 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 CT571256.1-201ENSMUST00000226045 585 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm23795-201ENSMUST00000084006 137 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm5583-201ENSMUST00000174328 1519 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CopaQ8CIE6 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm4989-201ENSMUST00000118711 749 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm6427-201ENSMUST00000118721 979 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm13537-201ENSMUST00000120467 267 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Mup-ps13-201ENSMUST00000120662 545 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Mup-ps1-201ENSMUST00000120720 544 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm3835-201ENSMUST00000120752 403 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CopaQ8CIE6 Gm28094-201ENSMUST00000185262 390 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms