Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC3.86□□□□□ -1.79
NipblQ6KCD5 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Gm23593-201ENSMUST00000104309 120 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Gm12149-201ENSMUST00000117511 654 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Gm22059-201ENSMUST00000157544 104 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Gm22326-201ENSMUST00000158897 351 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NipblQ6KCD5 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Gm2147-201ENSMUST00000193588 639 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Mir132-201ENSMUST00000083603 66 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NipblQ6KCD5 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NipblQ6KCD5 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NipblQ6KCD5 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NipblQ6KCD5 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NipblQ6KCD5 AC144772.1-201ENSMUST00000226372 2398 ntBASIC3.86□□□□□ -1.79
NipblQ6KCD5 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm25843-201ENSMUST00000122582 314 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Mir6516-201ENSMUST00000196236 110 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Desi2-202ENSMUST00000069568 1193 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 AC122769.3-201ENSMUST00000227739 3245 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm22119-201ENSMUST00000175594 99 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Mir7578-201ENSMUST00000183455 82 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm27805-201ENSMUST00000184513 79 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm18382-201ENSMUST00000194394 582 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm44308-201ENSMUST00000197080 99 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm18599-201ENSMUST00000206729 1125 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm37846-201ENSMUST00000191840 3774 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm43771-201ENSMUST00000202931 1578 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 AC131667.1-201ENSMUST00000214665 2175 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm7853-201ENSMUST00000100708 478 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm11584-201ENSMUST00000120636 325 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm14383-201ENSMUST00000121637 386 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm27249-201ENSMUST00000185049 328 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Gm8745-201ENSMUST00000207846 782 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 AC160031.1-201ENSMUST00000219914 522 ntBASIC3.85□□□□□ -1.79
NipblQ6KCD5 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NipblQ6KCD5 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NipblQ6KCD5 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC3.84□□□□□ -1.79
NipblQ6KCD5 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
NipblQ6KCD5 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms