Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Shmt1P50431 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.91□□□□□ -1.46
Shmt1P50431 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.91□□□□□ -1.46
Shmt1P50431 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Shmt1P50431 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Shmt1P50431 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Shmt1P50431 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm4914-201ENSMUST00000119757 459 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Gm15390-201ENSMUST00000120323 738 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Gm15116-201ENSMUST00000122248 663 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC5.9□□□□□ -1.46
Shmt1P50431 Mup-ps4-201ENSMUST00000151005 539 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm43308-201ENSMUST00000197236 373 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Gm18877-201ENSMUST00000207706 539 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Gm18597-201ENSMUST00000209519 694 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.9□□□□□ -1.46
Shmt1P50431 Gm18587-201ENSMUST00000213736 841 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Gm18338-201ENSMUST00000222381 560 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 CT030684.2-201ENSMUST00000228946 826 ntBASIC5.9□□□□□ -1.46
Shmt1P50431 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Shmt1P50431 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Shmt1P50431 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.9□□□□□ -1.46
Shmt1P50431 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Shmt1P50431 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Shmt1P50431 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Shmt1P50431 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.9□□□□□ -1.47
Shmt1P50431 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Shmt1P50431 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.9□□□□□ -1.47
Shmt1P50431 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Shmt1P50431 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Shmt1P50431 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.9□□□□□ -1.47
Shmt1P50431 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Shmt1P50431 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
Shmt1P50431 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.89□□□□□ -1.47
Shmt1P50431 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.89□□□□□ -1.47
Shmt1P50431 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm12393-201ENSMUST00000117084 848 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm15110-201ENSMUST00000117545 881 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm15531-201ENSMUST00000118062 252 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm12889-201ENSMUST00000118684 241 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm13991-201ENSMUST00000120190 648 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm13118-201ENSMUST00000120402 549 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm13808-201ENSMUST00000121353 184 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm11804-201ENSMUST00000121663 468 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm14413-201ENSMUST00000122158 408 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.89□□□□□ -1.47
Shmt1P50431 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm44370-201ENSMUST00000175436 112 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Gm27754-201ENSMUST00000183340 126 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Shmt1P50431 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm28859-201ENSMUST00000186650 616 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm21617-201ENSMUST00000188297 691 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm38395-201ENSMUST00000199904 830 ntBASIC5.89□□□□□ -1.47
Shmt1P50431 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms