Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx2P43241 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.79□□□□□ -1.64
Cdx2P43241 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Cdx2P43241 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Cdx2P43241 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.79□□□□□ -1.64
Cdx2P43241 Gm11584-201ENSMUST00000120636 325 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Gm12807-201ENSMUST00000121546 962 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 Gm6542-201ENSMUST00000153606 772 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Gm26098-201ENSMUST00000157247 288 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Gm26350-201ENSMUST00000157531 288 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Gm22804-201ENSMUST00000158052 101 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Gm23023-201ENSMUST00000158767 109 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Gm15740-201ENSMUST00000159703 1292 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdx2P43241 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Gm16456-201ENSMUST00000174431 920 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 AC153936.1-201ENSMUST00000219874 395 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 AC158511.1-201ENSMUST00000223622 764 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Nsa2-203ENSMUST00000225410 974 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdx2P43241 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.79□□□□□ -1.64
Cdx2P43241 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx2P43241 CT030159.1-201ENSMUST00000221580 2261 ntBASIC4.79□□□□□ -1.64
Cdx2P43241 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx2P43241 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC4.78□□□□□ -1.64
Cdx2P43241 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Cdx2P43241 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Cdx2P43241 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdx2P43241 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Cdx2P43241 AC163032.1-201ENSMUST00000220671 2970 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdx2P43241 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Cdx2P43241 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx2P43241 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm11369-201ENSMUST00000120812 318 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm22177-201ENSMUST00000175002 158 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Gm8614-201ENSMUST00000182528 978 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm27564-201ENSMUST00000185196 96 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Gm37670-201ENSMUST00000193622 229 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm45209-201ENSMUST00000207122 353 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx2P43241 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx2P43241 Desi2-202ENSMUST00000069568 1193 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Gm26330-201ENSMUST00000082817 104 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx2P43241 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx2P43241 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx2P43241 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.78□□□□□ -1.64
Cdx2P43241 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx2P43241 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Cdx2P43241 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC4.77□□□□□ -1.65
Cdx2P43241 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx2P43241 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx2P43241 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
Cdx2P43241 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Cdx2P43241 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Cdx2P43241 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx2P43241 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.77□□□□□ -1.65
Cdx2P43241 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.77□□□□□ -1.65
Cdx2P43241 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx2P43241 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx2P43241 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.77□□□□□ -1.65
Cdx2P43241 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx2P43241 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdx2P43241 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdx2P43241 Gm14304-201ENSMUST00000117272 446 ntBASIC4.77□□□□□ -1.65
Cdx2P43241 Gm15206-201ENSMUST00000119143 454 ntBASIC4.77□□□□□ -1.65
Cdx2P43241 Gm15227-201ENSMUST00000121844 399 ntBASIC4.77□□□□□ -1.65
Cdx2P43241 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
Cdx2P43241 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.77□□□□□ -1.65
Cdx2P43241 Gm23906-201ENSMUST00000157573 128 ntBASIC4.77□□□□□ -1.65
Cdx2P43241 Gm23354-201ENSMUST00000158426 104 ntBASIC4.77□□□□□ -1.65
Cdx2P43241 Rab26os-201ENSMUST00000176215 477 ntBASIC4.77□□□□□ -1.65
Cdx2P43241 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.77□□□□□ -1.65
Cdx2P43241 Mir7074-201ENSMUST00000183884 63 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms