Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC139754.3-201ENSMUST00000220444 1627 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Traf1P39428 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.04□□□□□ -1.44
Traf1P39428 Gm25865-201ENSMUST00000158247 104 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Gm25603-201ENSMUST00000158361 105 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Gm27781-201ENSMUST00000185185 92 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC6.04□□□□□ -1.44
Traf1P39428 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC6.04□□□□□ -1.44
Traf1P39428 Gm44412-201ENSMUST00000203018 294 ntBASIC6.04□□□□□ -1.44
Traf1P39428 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.04□□□□□ -1.44
Traf1P39428 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Traf1P39428 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Traf1P39428 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Traf1P39428 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Traf1P39428 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.04□□□□□ -1.44
Traf1P39428 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
Traf1P39428 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
Traf1P39428 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Traf1P39428 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Traf1P39428 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Traf1P39428 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Traf1P39428 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.03□□□□□ -1.44
Traf1P39428 Gm15670-201ENSMUST00000117740 447 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm13162-201ENSMUST00000121481 454 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm13077-201ENSMUST00000121941 484 ntBASIC6.03□□□□□ -1.44
Traf1P39428 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm23327-201ENSMUST00000157420 78 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm10087-201ENSMUST00000167650 330 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm17086-201ENSMUST00000171346 484 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm26731-201ENSMUST00000180683 543 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm27543-201ENSMUST00000183562 177 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.03□□□□□ -1.44
Traf1P39428 Gm9134-201ENSMUST00000193186 551 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm38360-201ENSMUST00000195130 454 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC6.03□□□□□ -1.44
Traf1P39428 Gm45422-201ENSMUST00000211476 246 ntBASIC6.03□□□□□ -1.44
Traf1P39428 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC6.03□□□□□ -1.44
Traf1P39428 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Traf1P39428 AC165260.4-201ENSMUST00000225924 724 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Traf1P39428 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Traf1P39428 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Traf1P39428 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Traf1P39428 Mir30b-201ENSMUST00000083542 96 ntBASIC6.03□□□□□ -1.44
Traf1P39428 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Traf1P39428 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Traf1P39428 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Traf1P39428 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Traf1P39428 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Traf1P39428 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Traf1P39428 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Traf1P39428 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Traf1P39428 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.02□□□□□ -1.45
Traf1P39428 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Traf1P39428 Gm25418-201ENSMUST00000104214 129 ntBASIC6.02□□□□□ -1.45
Traf1P39428 Gm16089-201ENSMUST00000117679 336 ntBASIC6.02□□□□□ -1.45
Traf1P39428 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.02□□□□□ -1.45
Traf1P39428 Gm12413-201ENSMUST00000121508 312 ntBASIC6.02□□□□□ -1.45
Traf1P39428 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Traf1P39428 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Traf1P39428 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC6.02□□□□□ -1.45
Traf1P39428 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.02□□□□□ -1.45
Traf1P39428 Gm28976-201ENSMUST00000188070 144 ntBASIC6.02□□□□□ -1.45
Traf1P39428 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.02□□□□□ -1.45
Traf1P39428 Gm19086-201ENSMUST00000190772 665 ntBASIC6.02□□□□□ -1.45
Traf1P39428 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.02□□□□□ -1.45
Traf1P39428 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC6.02□□□□□ -1.45
Traf1P39428 Gm8319-201ENSMUST00000205708 641 ntBASIC6.02□□□□□ -1.45
Traf1P39428 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.02□□□□□ -1.45
Traf1P39428 Gm18850-201ENSMUST00000211578 388 ntBASIC6.02□□□□□ -1.45
Traf1P39428 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.02□□□□□ -1.45
Traf1P39428 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.02□□□□□ -1.45
Traf1P39428 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Traf1P39428 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Traf1P39428 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Traf1P39428 Gm22971-201ENSMUST00000083305 97 ntBASIC6.02□□□□□ -1.45
Traf1P39428 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Traf1P39428 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Traf1P39428 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Traf1P39428 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Traf1P39428 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC6.02□□□□□ -1.45
Traf1P39428 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms