Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm26057-201ENSMUST00000178099 165 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm27409-201ENSMUST00000184727 80 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm28353-201ENSMUST00000186482 570 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm28533-201ENSMUST00000186741 570 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm18181-201ENSMUST00000190670 736 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm18775-201ENSMUST00000190763 586 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm37719-201ENSMUST00000194615 292 ntBASIC5.64□□□□□ -1.51
LdlrP35951 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.64□□□□□ -1.51
LdlrP35951 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.64□□□□□ -1.51
LdlrP35951 Gm43308-201ENSMUST00000197236 373 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm7946-201ENSMUST00000203326 958 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LdlrP35951 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LdlrP35951 Gm45870-201ENSMUST00000211269 601 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.64□□□□□ -1.51
LdlrP35951 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.64□□□□□ -1.51
LdlrP35951 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
LdlrP35951 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LdlrP35951 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LdlrP35951 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LdlrP35951 Gm16335-201ENSMUST00000077495 309 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LdlrP35951 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LdlrP35951 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LdlrP35951 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LdlrP35951 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
LdlrP35951 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.64□□□□□ -1.51
LdlrP35951 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LdlrP35951 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LdlrP35951 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LdlrP35951 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LdlrP35951 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.63□□□□□ -1.51
LdlrP35951 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LdlrP35951 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LdlrP35951 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
LdlrP35951 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm25647-201ENSMUST00000101832 78 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm25823-201ENSMUST00000101995 78 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LdlrP35951 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC5.63□□□□□ -1.51
LdlrP35951 Gm11105-201ENSMUST00000112781 478 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LdlrP35951 Gm14360-201ENSMUST00000120670 393 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm13440-201ENSMUST00000121665 496 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm12732-201ENSMUST00000121688 180 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm15038-201ENSMUST00000122144 296 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm11575-201ENSMUST00000122243 228 ntBASIC5.63□□□□□ -1.51
LdlrP35951 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LdlrP35951 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.63□□□□□ -1.51
LdlrP35951 Gm25826-201ENSMUST00000157090 137 ntBASIC5.63□□□□□ -1.51
LdlrP35951 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
LdlrP35951 Gm21772-201ENSMUST00000169213 478 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm8032-201ENSMUST00000171009 574 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LdlrP35951 Gm17126-201ENSMUST00000172276 523 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm24220-201ENSMUST00000177753 79 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm25988-201ENSMUST00000177759 79 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm23471-201ENSMUST00000177886 79 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm26488-201ENSMUST00000178225 79 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm23449-201ENSMUST00000179208 79 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm25221-201ENSMUST00000180051 79 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm23186-201ENSMUST00000180078 107 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm1972-201ENSMUST00000181606 964 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Mir6992-201ENSMUST00000183342 109 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC5.63□□□□□ -1.51
LdlrP35951 Gm7634-201ENSMUST00000185778 553 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm3605-201ENSMUST00000185858 440 ntBASIC5.63□□□□□ -1.51
LdlrP35951 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LdlrP35951 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC5.63□□□□□ -1.51
LdlrP35951 Gm28467-201ENSMUST00000190981 318 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm37235-201ENSMUST00000195171 59 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.63□□□□□ -1.51
LdlrP35951 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.63□□□□□ -1.51
LdlrP35951 Gm43054-201ENSMUST00000199495 884 ntBASIC5.63□□□□□ -1.51
LdlrP35951 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LdlrP35951 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.63□□□□□ -1.51
LdlrP35951 Gm45722-201ENSMUST00000213075 466 ntBASIC5.63□□□□□ -1.51
LdlrP35951 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.63□□□□□ -1.51
LdlrP35951 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.63□□□□□ -1.51
LdlrP35951 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.63□□□□□ -1.51
LdlrP35951 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms