Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm7846-201ENSMUST00000145844 274 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Lire1P11260 Gm22600-201ENSMUST00000157598 269 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm26489-201ENSMUST00000157880 264 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm26086-201ENSMUST00000157902 263 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm23280-201ENSMUST00000157905 139 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lire1P11260 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lire1P11260 Gm18406-201ENSMUST00000185872 669 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm37070-201ENSMUST00000193272 460 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm37774-201ENSMUST00000194401 245 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm37719-201ENSMUST00000194615 292 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm44376-201ENSMUST00000197570 128 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm43295-201ENSMUST00000201439 412 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm43440-201ENSMUST00000201957 729 ntBASIC5.24□□□□□ -1.57
Lire1P11260 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.24□□□□□ -1.57
Lire1P11260 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.24□□□□□ -1.57
Lire1P11260 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Lire1P11260 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.24□□□□□ -1.57
Lire1P11260 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.24□□□□□ -1.57
Lire1P11260 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.24□□□□□ -1.57
Lire1P11260 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lire1P11260 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Lire1P11260 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Lire1P11260 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.24□□□□□ -1.57
Lire1P11260 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lire1P11260 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lire1P11260 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lire1P11260 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Lire1P11260 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lire1P11260 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Lire1P11260 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lire1P11260 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.23□□□□□ -1.57
Lire1P11260 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lire1P11260 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Lire1P11260 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lire1P11260 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Mir449c-201ENSMUST00000102192 109 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm15233-201ENSMUST00000118747 400 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm11447-201ENSMUST00000118983 858 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm3931-201ENSMUST00000119038 455 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm14842-201ENSMUST00000119577 269 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm22492-201ENSMUST00000157192 297 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm25906-201ENSMUST00000158489 126 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm9671-201ENSMUST00000171502 547 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Mir3080-201ENSMUST00000175010 79 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lire1P11260 Gm6223-201ENSMUST00000178436 871 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lire1P11260 Gm18426-201ENSMUST00000191874 973 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm42539-201ENSMUST00000197009 308 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.23□□□□□ -1.57
Lire1P11260 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lire1P11260 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC5.23□□□□□ -1.57
Lire1P11260 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.23□□□□□ -1.57
Lire1P11260 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.23□□□□□ -1.57
Lire1P11260 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Lire1P11260 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lire1P11260 Gm8724-201ENSMUST00000081668 483 ntBASIC5.23□□□□□ -1.57
Lire1P11260 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Lire1P11260 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lire1P11260 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lire1P11260 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lire1P11260 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.23□□□□□ -1.57
Lire1P11260 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lire1P11260 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lire1P11260 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Lire1P11260 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Lire1P11260 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lire1P11260 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Lire1P11260 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lire1P11260 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lire1P11260 Gm15148-201ENSMUST00000117602 156 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm12230-201ENSMUST00000118301 454 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm7312-201ENSMUST00000118798 469 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm12448-201ENSMUST00000118852 655 ntBASIC5.22□□□□□ -1.57
Lire1P11260 Gm12757-201ENSMUST00000119465 800 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms