Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.42□□□□□ -1.54
Chmp6P0C0A3 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Chmp6P0C0A3 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm21756-201ENSMUST00000178380 930 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm4617-201ENSMUST00000178993 331 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm21405-201ENSMUST00000179024 930 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm27468-201ENSMUST00000183577 106 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm21191-201ENSMUST00000186484 930 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm29503-201ENSMUST00000191044 930 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm2011-203ENSMUST00000203750 435 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Desi2-202ENSMUST00000069568 1193 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chmp6P0C0A3 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm3267-201ENSMUST00000118671 473 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm15357-201ENSMUST00000119160 285 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm15828-201ENSMUST00000119911 522 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm12731-201ENSMUST00000120932 268 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm13162-201ENSMUST00000121481 454 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm23327-201ENSMUST00000157420 78 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm25907-201ENSMUST00000158486 125 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Scarna6-201ENSMUST00000158656 265 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm6047-201ENSMUST00000167221 574 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm37631-201ENSMUST00000192275 364 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm9442-201ENSMUST00000194242 319 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Gm42824-201ENSMUST00000199361 247 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Chmp6P0C0A3 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Chmp6P0C0A3 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
Chmp6P0C0A3 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Chmp6P0C0A3 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.4□□□□□ -1.55
Chmp6P0C0A3 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Chmp6P0C0A3 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Chmp6P0C0A3 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
Chmp6P0C0A3 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Chmp6P0C0A3 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Chmp6P0C0A3 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.39□□□□□ -1.55
Chmp6P0C0A3 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms