Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxd3P09027 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm45887-201ENSMUST00000212672 2998 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm43961-201ENSMUST00000203289 1872 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm25311-201ENSMUST00000104136 132 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm12245-201ENSMUST00000117266 357 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm13352-201ENSMUST00000117515 262 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm8475-201ENSMUST00000118211 526 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm5073-201ENSMUST00000118222 820 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm12040-201ENSMUST00000118357 537 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm14863-201ENSMUST00000119648 307 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.54□□□□□ -1.52
Hoxd3P09027 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm25281-201ENSMUST00000157270 104 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm22311-201ENSMUST00000158006 110 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm25640-201ENSMUST00000175378 125 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm25194-201ENSMUST00000177987 79 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm8649-201ENSMUST00000181799 233 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm27976-201ENSMUST00000183635 162 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm6501-201ENSMUST00000187178 916 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm37295-201ENSMUST00000192186 109 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Igkv4-77-201ENSMUST00000199410 352 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Crs-ps-201ENSMUST00000203723 760 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm43919-201ENSMUST00000204303 364 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm32983-201ENSMUST00000208500 505 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm18116-201ENSMUST00000220920 537 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm46424-201ENSMUST00000221567 168 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 AC173482.4-201ENSMUST00000225096 348 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm25699-201ENSMUST00000082896 167 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm43970-201ENSMUST00000204346 3605 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm37043-201ENSMUST00000194609 3105 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hoxd3P09027 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxd3P09027 Gm37206-201ENSMUST00000195512 3069 ntBASIC5.54□□□□□ -1.52
Hoxd3P09027 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms