Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a4A2AX52 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm25962-201ENSMUST00000157173 168 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm23354-201ENSMUST00000158426 104 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm30280-201ENSMUST00000192214 262 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm18462-201ENSMUST00000208112 417 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Mir20a-201ENSMUST00000083508 107 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm24031-201ENSMUST00000083930 131 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC4.12□□□□□ -1.75
Col6a4A2AX52 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC4.12□□□□□ -1.75
Col6a4A2AX52 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm15752-201ENSMUST00000117427 394 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm12112-201ENSMUST00000117772 231 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm11196-201ENSMUST00000119052 395 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm7449-201ENSMUST00000194393 663 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm5027-201ENSMUST00000206700 375 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm45434-201ENSMUST00000210550 293 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm25260-201ENSMUST00000083053 134 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm22758-201ENSMUST00000102275 96 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm15227-201ENSMUST00000121844 399 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm25348-201ENSMUST00000158961 111 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm8941-201ENSMUST00000181451 899 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm19739-201ENSMUST00000195941 153 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm44214-201ENSMUST00000204153 606 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm6828-201ENSMUST00000207902 1186 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a4A2AX52 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC4.11□□□□□ -1.75
Col6a4A2AX52 Gm37079-201ENSMUST00000194114 2135 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm23046-201ENSMUST00000158369 284 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm44648-201ENSMUST00000208267 329 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm7822-201ENSMUST00000222433 581 ntBASIC4.1□□□□□ -1.75
Col6a4A2AX52 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a4A2AX52 Gm23099-201ENSMUST00000083454 139 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms