Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm37421-201ENSMUST00000193088 132 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm45157-201ENSMUST00000208729 401 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Desi2-202ENSMUST00000069568 1193 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm24230-201ENSMUST00000104313 129 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm7657-201ENSMUST00000118851 666 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm15166-201ENSMUST00000120790 385 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm11805-201ENSMUST00000121238 600 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm22106-201ENSMUST00000122544 127 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm25865-201ENSMUST00000158247 104 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm7316-201ENSMUST00000165395 445 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm26925-201ENSMUST00000182470 957 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm29148-201ENSMUST00000188140 336 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm43015-201ENSMUST00000199087 565 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm18468-201ENSMUST00000207321 369 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm18470-201ENSMUST00000207467 420 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm18465-201ENSMUST00000207468 369 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm18464-201ENSMUST00000207803 420 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm18458-201ENSMUST00000207908 369 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm18461-201ENSMUST00000208421 420 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm44683-201ENSMUST00000209088 484 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Lima1Q9ERG0 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm24789-201ENSMUST00000104282 131 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm22468-201ENSMUST00000116680 120 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm26248-201ENSMUST00000116700 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm26137-201ENSMUST00000116701 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm26190-201ENSMUST00000116704 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm24617-201ENSMUST00000116705 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm25778-201ENSMUST00000116713 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm25774-201ENSMUST00000116717 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm22102-201ENSMUST00000116730 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm23177-201ENSMUST00000116784 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm24193-201ENSMUST00000116801 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm24744-201ENSMUST00000116833 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm24427-201ENSMUST00000116896 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm22346-201ENSMUST00000116918 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm23606-201ENSMUST00000116938 121 ntBASIC4.84□□□□□ -1.63
Lima1Q9ERG0 Gm22029-201ENSMUST00000116940 121 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms