Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm45965-201ENSMUST00000221192 1284 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 AC124433.2-201ENSMUST00000223867 291 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm23795-201ENSMUST00000084006 137 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm5155-201ENSMUST00000072381 2841 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm24715-201ENSMUST00000102377 95 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm15125-201ENSMUST00000116185 800 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm12467-201ENSMUST00000117625 745 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm14600-201ENSMUST00000121032 630 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Magea9-ps-201ENSMUST00000140655 732 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm15974-201ENSMUST00000159103 531 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm25944-201ENSMUST00000178758 94 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm25942-201ENSMUST00000180080 110 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm37700-201ENSMUST00000192617 965 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm43148-201ENSMUST00000198237 520 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm7990-201ENSMUST00000212126 593 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Ddx56Q9D0R4 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 AC120375.2-201ENSMUST00000226532 1853 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm11561-201ENSMUST00000117429 417 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm12850-201ENSMUST00000119210 436 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm5384-201ENSMUST00000120313 463 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm7309-201ENSMUST00000121670 581 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm12732-201ENSMUST00000121688 180 ntBASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ddx56Q9D0R4 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms