Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm23872-201ENSMUST00000175432 77 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm27820-201ENSMUST00000183628 175 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm27148-201ENSMUST00000185086 160 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm8719-201ENSMUST00000203602 534 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm8319-201ENSMUST00000205708 641 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm19095-201ENSMUST00000220533 730 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm23511-201ENSMUST00000083084 164 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm25818-201ENSMUST00000083282 164 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.78□□□□□ -1.48
Smc1aQ9CU62 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.77□□□□□ -1.48
Smc1aQ9CU62 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
Smc1aQ9CU62 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm11313-201ENSMUST00000118779 432 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Mir6400-201ENSMUST00000184870 92 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm37882-201ENSMUST00000195254 196 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm44214-201ENSMUST00000204153 606 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm7688-201ENSMUST00000212857 337 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm9472-201ENSMUST00000221625 526 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 AV026068-224ENSMUST00000224827 928 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Smc1aQ9CU62 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm11781-201ENSMUST00000118328 472 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm7312-201ENSMUST00000118798 469 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm25389-201ENSMUST00000157340 286 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm23327-201ENSMUST00000157420 78 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm44604-201ENSMUST00000205475 496 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Gm22456-201ENSMUST00000082578 125 ntBASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Smc1aQ9CU62 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms