Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
Use1Q9CQ56 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.74□□□□□ -1.65
Use1Q9CQ56 AC127242.4-201ENSMUST00000221242 470 ntBASIC4.74□□□□□ -1.65
Use1Q9CQ56 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.74□□□□□ -1.65
Use1Q9CQ56 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.74□□□□□ -1.65
Use1Q9CQ56 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.74□□□□□ -1.65
Use1Q9CQ56 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.74□□□□□ -1.65
Use1Q9CQ56 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Use1Q9CQ56 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.74□□□□□ -1.65
Use1Q9CQ56 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Mir879-201ENSMUST00000104703 76 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm12717-201ENSMUST00000118427 983 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm15012-201ENSMUST00000119176 106 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm12768-201ENSMUST00000120055 759 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm14725-201ENSMUST00000120324 828 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm15534-201ENSMUST00000137642 562 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm26731-201ENSMUST00000180683 543 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm26925-201ENSMUST00000182470 957 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm33952-201ENSMUST00000197795 408 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm38670-201ENSMUST00000199248 77 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm24919-201ENSMUST00000083020 106 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.73□□□□□ -1.65
Use1Q9CQ56 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Use1Q9CQ56 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Use1Q9CQ56 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm24429-201ENSMUST00000104076 132 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm14575-201ENSMUST00000117210 560 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm13195-201ENSMUST00000117229 261 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm12849-201ENSMUST00000120013 739 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm24371-201ENSMUST00000122662 267 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm23318-201ENSMUST00000158000 108 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm24295-201ENSMUST00000158298 131 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm7152-201ENSMUST00000163570 605 ntBASIC4.72□□□□□ -1.65
Use1Q9CQ56 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms