Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm22374-201ENSMUST00000104583 132 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm25773-201ENSMUST00000116718 127 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm25848-201ENSMUST00000116790 144 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm11406-201ENSMUST00000117418 484 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm7206-201ENSMUST00000117730 508 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm6744-201ENSMUST00000119303 543 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm12881-201ENSMUST00000121191 203 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm15840-201ENSMUST00000122099 943 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm24840-201ENSMUST00000122603 147 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm25117-201ENSMUST00000157194 144 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm17038-201ENSMUST00000166586 494 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm3496-201ENSMUST00000188283 745 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm29592-201ENSMUST00000189434 370 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm43717-201ENSMUST00000198684 310 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm19617-201ENSMUST00000202977 308 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm44234-201ENSMUST00000204246 900 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm44817-201ENSMUST00000205416 453 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm18414-201ENSMUST00000210858 694 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm8863-201ENSMUST00000216630 926 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim8Q99PJ2 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trim8Q99PJ2 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.71□□□□□ -1.49
Trim8Q99PJ2 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Trim8Q99PJ2 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trim8Q99PJ2 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Trim8Q99PJ2 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Trim8Q99PJ2 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.71□□□□□ -1.49
Trim8Q99PJ2 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm11227-201ENSMUST00000119774 471 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm13991-201ENSMUST00000120190 648 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm16053-201ENSMUST00000120511 188 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm6977-201ENSMUST00000121568 512 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm22186-201ENSMUST00000157822 122 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm25660-201ENSMUST00000158470 104 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm20480-201ENSMUST00000173953 250 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm27004-201ENSMUST00000183300 727 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm27348-201ENSMUST00000184511 170 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm27998-201ENSMUST00000184902 361 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm37193-201ENSMUST00000193087 513 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm412-201ENSMUST00000193360 948 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm38279-201ENSMUST00000194067 1131 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm43368-201ENSMUST00000200638 409 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm43884-201ENSMUST00000204251 559 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm45965-201ENSMUST00000221192 1284 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 Gm18338-201ENSMUST00000222381 560 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 AC117656.3-204ENSMUST00000225656 859 ntBASIC5.71□□□□□ -1.5
Trim8Q99PJ2 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms