Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.03□□□□□ -1.6
Trub1Q8C0D0 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.03□□□□□ -1.6
Trub1Q8C0D0 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.03□□□□□ -1.6
Trub1Q8C0D0 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.03□□□□□ -1.6
Trub1Q8C0D0 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.03□□□□□ -1.6
Trub1Q8C0D0 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.03□□□□□ -1.6
Trub1Q8C0D0 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trub1Q8C0D0 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trub1Q8C0D0 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm11822-201ENSMUST00000119177 415 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm13438-201ENSMUST00000120100 573 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm6620-201ENSMUST00000120113 715 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm13024-201ENSMUST00000121756 718 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm13738-201ENSMUST00000122437 469 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm25290-201ENSMUST00000122796 144 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm12854-201ENSMUST00000128518 297 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm23673-201ENSMUST00000157474 298 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm23534-201ENSMUST00000157539 97 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm27849-201ENSMUST00000183673 125 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm28389-201ENSMUST00000190090 697 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm44261-201ENSMUST00000203337 209 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm7665-201ENSMUST00000076710 297 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm23796-201ENSMUST00000084011 160 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trub1Q8C0D0 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm25919-201ENSMUST00000104271 132 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm11196-201ENSMUST00000119052 395 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm14175-201ENSMUST00000119835 241 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm14369-201ENSMUST00000121355 285 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm8669-201ENSMUST00000183839 945 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm28769-201ENSMUST00000190176 615 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm17981-201ENSMUST00000191109 739 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm44795-201ENSMUST00000205496 319 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm19201-201ENSMUST00000210127 778 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm272-201ENSMUST00000222073 919 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trub1Q8C0D0 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.01□□□□□ -1.61
Trub1Q8C0D0 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms