Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.9□□□□□ -1.3
Usp47Q8BY87 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp47Q8BY87 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
Usp47Q8BY87 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp47Q8BY87 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.9□□□□□ -1.3
Usp47Q8BY87 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp47Q8BY87 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp47Q8BY87 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp47Q8BY87 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
Usp47Q8BY87 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp47Q8BY87 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Gm13195-201ENSMUST00000117229 261 ntBASIC6.9□□□□□ -1.31
Usp47Q8BY87 Gm12328-201ENSMUST00000118611 197 ntBASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.9□□□□□ -1.31
Usp47Q8BY87 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp47Q8BY87 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Gm18150-201ENSMUST00000195341 645 ntBASIC6.9□□□□□ -1.31
Usp47Q8BY87 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.9□□□□□ -1.31
Usp47Q8BY87 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Usp47Q8BY87 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp47Q8BY87 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp47Q8BY87 AC187103.2-201ENSMUST00000223605 1617 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 Mir292-201ENSMUST00000104847 82 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm16285-201ENSMUST00000162999 347 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm6719-201ENSMUST00000202067 335 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm44402-201ENSMUST00000203677 238 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 AV026068-220ENSMUST00000224153 1147 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 AV026068-224ENSMUST00000224827 928 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.89□□□□□ -1.31
Usp47Q8BY87 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp47Q8BY87 Gm37115-201ENSMUST00000193750 2849 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm22657-201ENSMUST00000104197 132 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm13311-201ENSMUST00000117863 379 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm12704-201ENSMUST00000119789 464 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm15905-201ENSMUST00000137042 298 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm22940-201ENSMUST00000158560 155 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm16589-201ENSMUST00000159522 918 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm8614-201ENSMUST00000182528 978 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Usp47Q8BY87 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm22350-201ENSMUST00000083924 156 ntBASIC6.88□□□□□ -1.31
Usp47Q8BY87 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp47Q8BY87 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp47Q8BY87 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.87□□□□□ -1.31
Usp47Q8BY87 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm15170-201ENSMUST00000121593 2023 ntBASIC6.87□□□□□ -1.31
Usp47Q8BY87 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm22488-201ENSMUST00000116811 127 ntBASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm14909-201ENSMUST00000117853 351 ntBASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm11910-201ENSMUST00000121624 432 ntBASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm18828-202ENSMUST00000181035 310 ntBASIC6.87□□□□□ -1.31
Usp47Q8BY87 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms